If you get the following error in Wireshark:
SIOCGIFFLAGS: bonding_masters: No such device
It can be fixed by manually setting the interface. Go to Capture > Options, OK on the error message (it might not appear, but check the taskbar), and after that you should be able to put your bond interface name in the Interface box at the top. (I’m using version 1.4.6 of Wireshark)
UPDATE: having deleted the bonded interface I’m still getting Wireshark errors. I’ll post if I find a fix.